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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6271342_6272381_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6271342 - 6272381

Intron Length:

1040

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTCTG

5'SS Class:

major

3'SS Sequence:

GTTTAAATCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TCATTTATAATT

Flanking Amino Acid:

PVLQVPIHVEEPAFLPDPND

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

66.4

45.1

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

65.7

0.35

56.3

43.3

Minor 5ss

39.1

-1.2

46.9

42.4

Minor BPS

0.33

1.6

72.75

38.8

Associated Gene:

Gene:

ERN1

Ensembl Gene ID:

ENSAPLG00000007775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042721

6261101 - 6287964

26864

ENSAPLT00000008171

6262536 - 6287964

25429