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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6279327_6280353_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6279327 - 6280353

Intron Length:

1027

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

GTGTTATTAATT

Flanking Amino Acid:

SMVHEGVAVMPRGSAIPLLE

Intron Amino Acid Position:

298

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

71.5

41.1

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

83.9

0.76

0.7

76.9

31.7

Minor 5ss

39.7

-1.2

2.8

46.4

44.2

Minor BPS

64.2

0.52

1.6

77.41

39.2

Associated Gene:

Gene:

ERN1

Ensembl Gene ID:

ENSAPLG00000007775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042721

6261101 - 6287964

26864

ENSAPLT00000008171

6262536 - 6287964

25429