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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6287159_6287390_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6287159 - 6287390

Intron Length:

232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTATGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TGTATTTTATGT

Flanking Amino Acid:

REHITVPLQTDLRKFRSYKG

Intron Amino Acid Position:

868

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.1

35.1

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

0.81

0.9

80.8

36.4

Minor 5ss

29.8

-2.3

3.3

37.5

47.2

Minor BPS

48.6

-0

1.9

68.51

42.7

Associated Gene:

Gene:

ERN1

Ensembl Gene ID:

ENSAPLG00000007775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042721

6261101 - 6287964

26864

ENSAPLT00000008171

6262536 - 6287964

25429