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Intron Name: Anas_platyrhynchos_platyrhynchos_19_629778_634068_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

629778 - 634068

Intron Length:

4291

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTGAAG

5'SS Class:

major

3'SS Sequence:

CCGCACCCGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

TTCCCCGCACCC

Flanking Amino Acid:

VDSAVKEAIKGTQVNFPKPS

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

62.4

43.6

Major BPS

61.3

0.28

52.7

34.2

Major PPT

56.5

0.15

50.3

33.8

Minor 5ss

30.3

-2.3

3.3

38.8

46.6

Minor BPS

43.5

-0.5

2.3

59.94

45.2

Associated Gene:

Gene:

MYOCD

Ensembl Gene ID:

ENSAPLG00000013526

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032362

620339 - 825184

204846

ENSAPLT00000031441

620339 - 803070

182732

ENSAPLT00000047322

620493 - 732628

112136

ENSAPLT00000021780

620493 - 732525

112033

ENSAPLT00000046004

620339 - 656335

35997

ENSAPLT00000014120

620339 - 657093

36755

ENSAPLT00000045607

620339 - 732710

112372