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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6413409_6413761_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6413409 - 6413761

Intron Length:

353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTGTA

5'SS Class:

major

3'SS Sequence:

TTTAAATTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

GCCTCTTTAAAT

Flanking Amino Acid:

SFEYCARIFKQHFMDSRIPC

Intron Amino Acid Position:

513

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

75.3

34.3

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

80.8

0.69

0.9

74.1

40.1

Minor 5ss

38.7

-1.3

49.8

46.5

Minor BPS

66.3

0.59

1.4

73.53

43.4

Associated Gene:

Gene:

RHOT1

Ensembl Gene ID:

ENSAPLG00000006989

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007301

6404464 - 6430277

25814