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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6414662_6414991_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6414662 - 6414991

Intron Length:

330

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGGAAC

5'SS Class:

major

3'SS Sequence:

TCTTAATTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

AAATTCTTAATT

Flanking Amino Acid:

LQALLGRNLIRQRQIRAEHK

Intron Amino Acid Position:

445

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

68.5

36.2

Major BPS

0.92

0.9

86.2

29.1

Major PPT

84.4

0.77

0.8

81.4

34.9

Minor 5ss

34.4

-1.8

3.2

44.6

38.4

Minor BPS

74.8

0.86

1.1

80.28

35.2

Associated Gene:

Gene:

RHOT1

Ensembl Gene ID:

ENSAPLG00000006989

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007301

6404464 - 6430277

25814