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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6415123_6415356_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6415123 - 6415356

Intron Length:

234

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCTCAAAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

ATTTTCTCAAAA

Flanking Amino Acid:

EQESQASAITVTRDKKIDLQ

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

85.1

25.8

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

67.4

0.39

1.1

69.3

35.4

Minor 5ss

35.1

-1.7

2.7

42.4

44.3

Minor BPS

64.3

0.44

1.6

75.34

35.4

Associated Gene:

Gene:

RHOT1

Ensembl Gene ID:

ENSAPLG00000006989

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007301

6404464 - 6430277

25814