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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6415458_6416092_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6415458 - 6416092

Intron Length:

635

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAAGTGTG

5'SS Class:

major

3'SS Sequence:

CCCCCTCTACTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAACAAT

U12 Branch Point Sequence:

AATTCAGTAACT

Flanking Amino Acid:

ITYQGFLSQWTLTTYLDVQR

Intron Amino Acid Position:

367

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

1.3

76.2

39.9

Major BPS

57.4

0.18

1.3

65.4

Major PPT

64.9

0.34

0.8

58.1

31.7

Minor 5ss

37.7

-1.4

3.3

48.5

41.2

Minor BPS

57.3

0.31

2.2

81.19

39.9

Associated Gene:

Gene:

RHOT1

Ensembl Gene ID:

ENSAPLG00000006989

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007301

6404464 - 6430277

25814