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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6418541_6418982_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6418541 - 6418982

Intron Length:

442

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTCTG

5'SS Class:

strong_major

3'SS Sequence:

GATTTTTTGTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

GCTCTTTTGATT

Flanking Amino Acid:

LNDAELNFFQRICFNTPLAP

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

1.1

72.7

44.5

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

73.2

0.52

73.8

41.4

Minor 5ss

43.4

-0.7

2.9

58.6

45.9

Minor BPS

57.5

0.32

1.2

68.02

37.4

Associated Gene:

Gene:

RHOT1

Ensembl Gene ID:

ENSAPLG00000006989

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007301

6404464 - 6430277

25814