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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6420629_6421203_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6420629 - 6421203

Intron Length:

575

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTTAA

U12 Branch Point Sequence:

AGTGTAAGAATT

Flanking Amino Acid:

QYTEIETCVECSAKNLKNIS

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

86.6

22.3

Major BPS

64.3

0.36

1.2

55.7

41.6

Major PPT

88.1

0.86

0.7

85.6

28.2

Minor 5ss

30.6

-2.2

2.6

35.8

41.1

Minor BPS

41.5

-0.5

1.9

57.99

38.6

Associated Gene:

Gene:

RHOT1

Ensembl Gene ID:

ENSAPLG00000006989

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007301

6404464 - 6430277

25814