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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6424067_6426314_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6424067 - 6426314

Intron Length:

2248

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGAACAT

5'SS Class:

major

3'SS Sequence:

TCTACAACTCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GTGTCTACAACT

Flanking Amino Acid:

SLVSEEFPEEVPPRAEEITI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

64.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

58.9

0.2

1.1

54.5

39.4

Minor 5ss

31.6

-2.1

3.5

46.9

48.4

Minor BPS

53.8

0.2

1.9

74.1

42.5

Associated Gene:

Gene:

RHOT1

Ensembl Gene ID:

ENSAPLG00000006989

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007301

6404464 - 6430277

25814