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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6426374_6430240_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6426374 - 6430240

Intron Length:

3867

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGAGTGCG

5'SS Class:

major

3'SS Sequence:

AATTCTTTTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTGTTTTTAATT

Flanking Amino Acid:

KDVRILLVGEPRVGKTSLIM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.3

65.8

40.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.3

0.66

0.8

74.2

35.5

Minor 5ss

28.9

-2.4

31.8

35.2

Minor BPS

71.1

0.74

1.2

78.42

39.1

Associated Gene:

Gene:

RHOT1

Ensembl Gene ID:

ENSAPLG00000006989

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007301

6404464 - 6430277

25814