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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6452523_6453228_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6452523 - 6453228

Intron Length:

706

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTATGTTGA

5'SS Class:

major

3'SS Sequence:

TGTCTTTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

CTTTTTTCAAGT

Flanking Amino Acid:

YLKDKCLALHGEDETNKADQ

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

39.7

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

80.7

0.69

0.9

76.5

37.5

Minor 5ss

46.1

-0.4

2.5

46.6

Minor BPS

55.2

0.24

1.9

74.97

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017748

6449858 - 6456264

6407