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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6490049_6490980_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6490049 - 6490980

Intron Length:

932

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATATTA

5'SS Class:

strong_major

3'SS Sequence:

TTGGTGTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACACAT

U12 Branch Point Sequence:

TTACCCATAACA

Flanking Amino Acid:

VAQMTVFDKNRRLQLLDGEY

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

79.7

29.1

Major BPS

61.1

0.28

29.8

Major PPT

69.1

0.43

1.1

64.5

45.9

Minor 5ss

41.6

-0.9

3.1

56.5

47.5

Minor BPS

69.2

0.6

1.6

79.47

35.7

Associated Gene:

Gene:

SUZ12

Ensembl Gene ID:

ENSAPLG00000006190

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006441

6484513 - 6499088

14576

ENSAPLT00000043746

6484513 - 6496673

12161