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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6528979_6529267_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6528979 - 6529267

Intron Length:

289

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCTTTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GGTCTTTTAATA

Flanking Amino Acid:

RKMIQIEKEQESCKMLHLRE

Intron Amino Acid Position:

522

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

34.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

71.5

0.48

0.9

72.3

32.3

Minor 5ss

42.3

-0.9

2.8

52.9

38.3

Minor BPS

62.9

0.4

1.2

65.8

34.4

Associated Gene:

Gene:

UTP6

Ensembl Gene ID:

ENSAPLG00000005821

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006098

6518369 - 6530072

11704