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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6744545_6745031_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6744545 - 6745031

Intron Length:

487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTATATCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TATTTTATATCT

Flanking Amino Acid:

FNKEREATQELIEDLRKELE

Intron Amino Acid Position:

623

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.9

76.2

39.9

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

83.9

0.76

0.8

78.3

Minor 5ss

39.9

-1.1

3.4

49.2

Minor BPS

54.7

0.23

1.8

77.51

38.9

Associated Gene:

Gene:

RAB11FIP4

Ensembl Gene ID:

ENSAPLG00000005346

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036888

6741831 - 6857515

115685

ENSAPLT00000005547

6741831 - 6857515

115685