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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6745549_6746098_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6745549 - 6746098

Intron Length:

550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

ATTATTGATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

TTTGCTGTAAGA

Flanking Amino Acid:

KGTEIELLNTRVQQLEDENG

Intron Amino Acid Position:

549

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

84.2

26.4

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

72.3

0.5

1.1

65.9

Minor 5ss

33.8

-1.8

2.9

42.8

44.4

Minor BPS

49.3

-0

2.3

70.26

42.8

Associated Gene:

Gene:

RAB11FIP4

Ensembl Gene ID:

ENSAPLG00000005346

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036888

6741831 - 6857515

115685

ENSAPLT00000005547

6741831 - 6857515

115685