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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6748298_6749768_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6748298 - 6749768

Intron Length:

1471

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

TGTATCTTTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATCAT

U12 Branch Point Sequence:

ATTCCTATATCA

Flanking Amino Acid:

EARLKNLKANSPNRKISSTA

Intron Amino Acid Position:

422

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.2

39.9

Major BPS

79.4

0.73

80.1

Major PPT

0.65

0.8

73.8

36.7

Minor 5ss

39.7

-1.2

2.9

52.1

44.7

Minor BPS

50.9

0.02

1.8

68.36

37.7

Associated Gene:

Gene:

RAB11FIP4

Ensembl Gene ID:

ENSAPLG00000005346

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036888

6741831 - 6857515

115685

ENSAPLT00000005547

6741831 - 6857515

115685