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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6749904_6751464_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6749904 - 6751464

Intron Length:

1561

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGCTCCT

5'SS Class:

weak_major

3'SS Sequence:

TTCCTGCAAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTACTAT

U12 Branch Point Sequence:

TTTCCTGCAAAC

Flanking Amino Acid:

YSDLGSSVSSSAGQTPRKMR

Intron Amino Acid Position:

377

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.5

0.22

1.4

58.3

46.2

Major BPS

62.1

0.3

1.4

61.1

Major PPT

66.9

0.38

62.3

37.7

Minor 5ss

37.4

-1.4

3.1

44.5

Minor BPS

46.4

-0.2

2.2

65.4

Associated Gene:

Gene:

RAB11FIP4

Ensembl Gene ID:

ENSAPLG00000005346

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005547

6741831 - 6857515

115685