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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6751657_6754945_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6751657 - 6754945

Intron Length:

3289

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

ACGTTTTGACCT

Flanking Amino Acid:

VLGGLFLPGDKSSPHNPSAA

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

35.2

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

0.72

0.8

79.6

32.4

Minor 5ss

30.7

-2.2

3.3

40.4

Minor BPS

47.9

-0

1.7

61.92

42.7

Associated Gene:

Gene:

RAB11FIP4

Ensembl Gene ID:

ENSAPLG00000005346

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005547

6741831 - 6857515

115685