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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6755170_6808270_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6755170 - 6808270

Intron Length:

53101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGAA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTTGCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

ATGATCTGAACT

Flanking Amino Acid:

EPQYDDYYYQGGEIQDCTYL

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.3

34.5

Major BPS

81.9

0.79

0.9

80.1

Major PPT

81.1

0.7

0.9

76.2

37.8

Minor 5ss

28.3

-2.5

3.5

37.3

47.4

Minor BPS

62.4

0.47

1.5

75.92

40.4

Associated Gene:

Gene:

RAB11FIP4

Ensembl Gene ID:

ENSAPLG00000005346

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036888

6741831 - 6857515

115685

ENSAPLT00000005547

6741831 - 6857515

115685