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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6818611_6856978_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6818611 - 6856978

Intron Length:

38368

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TATTTTATAATC

Flanking Amino Acid:

LGLQFGQGEEVEKLAKYLDP

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

88.4

0.86

0.9

94.6

18.5

Minor 5ss

26.2

-2.7

2.9

30.6

42.9

Minor BPS

61.9

0.35

1.5

71.8

33.1

Associated Gene:

Gene:

RAB11FIP4

Ensembl Gene ID:

ENSAPLG00000005346

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036888

6741831 - 6857515

115685

ENSAPLT00000005547

6741831 - 6857515

115685