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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6872032_6872948_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6872032 - 6872948

Intron Length:

917

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCCCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TCTAATTTACTT

Flanking Amino Acid:

TELPLIMWLQGGPGASGCGF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.8

88.6

27.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

76.3

0.59

0.8

74.7

30.6

Minor 5ss

42.7

-0.8

3.4

64.1

47.4

Minor BPS

49.6

0.05

1.8

68.97

42.6

Associated Gene:

Gene:

SCPEP1

Ensembl Gene ID:

ENSAPLG00000005127

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005326

6863542 - 6873844

10303