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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6886360_6887819_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6886360 - 6887819

Intron Length:

1460

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGTAT

5'SS Class:

major

3'SS Sequence:

ATTGATATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

CAAACCATAATG

Flanking Amino Acid:

VSQPKEKKTEEKQTARKAKP

Intron Amino Acid Position:

370

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

70.2

36.1

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

74.6

0.55

67.1

42.9

Minor 5ss

44.6

-0.6

3.2

64.1

47.4

Minor BPS

-0.2

1.7

51.44

42.6

Associated Gene:

Gene:

TRIM25

Ensembl Gene ID:

ENSAPLG00000019496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037520

6882869 - 6892209

9341

ENSAPLT00000024381

6882869 - 6892209

9341