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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6887904_6888349_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6887904 - 6888349

Intron Length:

446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

CTCCCTTCACAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TCTCCCTTCACA

Flanking Amino Acid:

PVPGRKPVGPQRPNKEKKPS

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

1.2

84.4

33.5

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

0.25

60.5

34.3

Minor 5ss

39.8

-1.1

2.8

52.2

37.4

Minor BPS

67.9

0.56

1.8

76.69

40.5

Associated Gene:

Gene:

TRIM25

Ensembl Gene ID:

ENSAPLG00000019496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037520

6882869 - 6892209

9341

ENSAPLT00000024381

6882869 - 6892209

9341