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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6888416_6889425_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6888416 - 6889425

Intron Length:

1010

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTAAGTGGT

5'SS Class:

major

3'SS Sequence:

TTTGTCAATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

CTTTTGTCAATA

Flanking Amino Acid:

QEPLQEEADNRAPNMGAPST

Intron Amino Acid Position:

420

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.46

1.3

67.4

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

76.6

0.6

70.6

39.1

Minor 5ss

36.3

-1.6

3.3

53.8

43.7

Minor BPS

49.1

-0

2.2

66.51

40.8

Associated Gene:

Gene:

TRIM25

Ensembl Gene ID:

ENSAPLG00000019496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037520

6882869 - 6892209

9341