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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6889555_6890218_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6889555 - 6890218

Intron Length:

664

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGATAT

5'SS Class:

major

3'SS Sequence:

CATGTCTTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTCAT

U12 Branch Point Sequence:

CTACCTTCAACT

Flanking Amino Acid:

LQKDREELLQYAANITLDFN

Intron Amino Acid Position:

472

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

70.7

35.9

Major BPS

74.4

0.61

1.2

77.7

37.1

Major PPT

79.4

0.66

0.9

72.3

37.5

Minor 5ss

41.6

-0.9

3.2

57.2

46.9

Minor BPS

60.9

0.42

1.6

74.65

41.9

Associated Gene:

Gene:

TRIM25

Ensembl Gene ID:

ENSAPLG00000019496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037520

6882869 - 6892209

9341

ENSAPLT00000031341

6882869 - 6892209

9341

ENSAPLT00000024381

6882869 - 6892209

9341