Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_6918821_6919739_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6918821 - 6919739

Intron Length:

919

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTACA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTATTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

TTTTCCTTTATT

Flanking Amino Acid:

EFKILLNPVQVFDLSKTTPA

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

82.6

29.6

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

80.4

0.68

0.8

73.7

35.6

Minor 5ss

36.1

-1.6

2.6

Minor BPS

81.6

1.08

1.4

96.2

29.4

Associated Gene:

Gene:

DGKE

Ensembl Gene ID:

ENSAPLG00000004745

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026069

6906230 - 6923257

17028

ENSAPLT00000024038

6912406 - 6923257

10852

ENSAPLT00000004901

6906230 - 6922481

16252