Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_6920360_6922017_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6920360 - 6922017

Intron Length:

1658

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGCAA

5'SS Class:

major

3'SS Sequence:

TTTCTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

AGGATTTCAGTT

Flanking Amino Acid:

CGTQPKLCDYRCVWCQCTVH

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.1

58.8

41.7

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

94.6

0.6

88.2

29.1

Minor 5ss

29.1

-2.4

3.4

38.6

46.4

Minor BPS

42.4

-0.5

1.6

51.47

37.3

Associated Gene:

Gene:

DGKE

Ensembl Gene ID:

ENSAPLG00000004745

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004901

6906230 - 6922481

16252

ENSAPLT00000026069

6906230 - 6923257

17028

ENSAPLT00000024038

6912406 - 6923257

10852