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Intron Name: Anas_platyrhynchos_platyrhynchos_19_7271258_7301904_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7271258 - 7301904

Intron Length:

30647

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCGA

5'SS Class:

strong_major

3'SS Sequence:

AATTATTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TACTCCTTAATT

Flanking Amino Acid:

LRLQKDNPFTRFMNHPAPAN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.8

38.6

Major BPS

76.9

0.67

66.3

40.4

Major PPT

69.2

0.43

63.4

41.8

Minor 5ss

33.6

-1.9

2.9

41.7

44.7

Minor BPS

1.14

89.11

35.7

Associated Gene:

Gene:

MMD

Ensembl Gene ID:

ENSAPLG00000004393

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030969

7270338 - 7311530

41193