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Intron Name: Anas_platyrhynchos_platyrhynchos_19_7295896_7301904_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7295896 - 7301904

Intron Length:

6009

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGAT

5'SS Class:

strong_major

3'SS Sequence:

AATTATTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TACTCCTTAATT

Flanking Amino Acid:

MRRLQERFRRFMNHPAPAN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.8

78.2

31.2

Major BPS

76.9

0.67

66.3

40.4

Major PPT

69.2

0.43

63.4

41.8

Minor 5ss

25.4

-2.8

3.5

36.8

47.7

Minor BPS

1.14

89.11

35.7

Associated Gene:

Gene:

MMD

Ensembl Gene ID:

ENSAPLG00000004393

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004546

7295867 - 7311530

15664