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Intron Name: Anas_platyrhynchos_platyrhynchos_19_7301987_7307695_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7301987 - 7307695

Intron Length:

5709

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TTTTGGTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

AGTACATTAACA

Flanking Amino Acid:

EHAANCYTHAFLIVPAIVGS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

78.5

35.5

Major BPS

0.52

1.1

77.7

35.3

Major PPT

83.1

0.74

0.8

81.2

36.5

Minor 5ss

40.6

-1.1

2.8

58.6

39.3

Minor BPS

0.47

1.6

73.32

37.4

Associated Gene:

Gene:

MMD

Ensembl Gene ID:

ENSAPLG00000004393

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030969

7270338 - 7311530

41193

ENSAPLT00000004546

7295867 - 7311530

15664