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Intron Name: Anas_platyrhynchos_platyrhynchos_19_7307857_7308694_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7307857 - 7308694

Intron Length:

838

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCATTA

5'SS Class:

weak_major

3'SS Sequence:

TTTCTCCTACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TCTTCCTTGATG

Flanking Amino Acid:

HIVSWKKSHLRTMEHCFHMC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.2

70.4

36.4

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

76.9

0.61

0.8

71.4

34.3

Minor 5ss

61.1

0.37

2.4

73.7

42.9

Minor BPS

76.3

0.68

1.2

74.24

38.7

Associated Gene:

Gene:

MMD

Ensembl Gene ID:

ENSAPLG00000004393

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030969

7270338 - 7311530

41193

ENSAPLT00000004546

7295867 - 7311530

15664