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Intron Name: Anas_platyrhynchos_platyrhynchos_19_7308770_7309157_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7308770 - 7309157

Intron Length:

388

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTACTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

CATTCATTAATT

Flanking Amino Acid:

YVFIAASYAPWLNLRELGPL

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

71.6

38.4

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

79.5

0.66

0.9

70.1

40.4

Minor 5ss

-1.8

2.9

40.9

39.4

Minor BPS

70.6

0.73

1.6

82.44

38.8

Associated Gene:

Gene:

MMD

Ensembl Gene ID:

ENSAPLG00000004393

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030969

7270338 - 7311530

41193

ENSAPLT00000004546

7295867 - 7311530

15664