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Intron Name: Anas_platyrhynchos_platyrhynchos_19_732711_824990_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
732711 - 824990

Intron Length:
92280

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGATTTT

5'SS Class:
major

3'SS Sequence:
TCTTCTCTTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATTTGAG

U12 Branch Point Sequence:
ATTTGAGAATTT

Flanking Amino Acid:
PVLLIQQRHFRGRFGVWFST

Intron Amino Acid Position:
65

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.8
0.7
1
81.2
33.8

Major BPS
63.6
0.34
1.5
63.1
44.4

Major PPT
90.3
0.91
0.6
88.5
21.1

Minor 5ss
44.1
-0.6
3.3
66.4
45.1

Minor BPS
34.6
-1
2.6
58.73
45

Associated Gene:

Gene:
MYOCD

Ensembl Gene ID:

Chromosome:
19

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

620339 - 825184
204846

620339 - 825184
204846