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Intron Name: Anas_platyrhynchos_platyrhynchos_19_7329909_7356642_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7329909 - 7356642

Intron Length:

26734

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATCAG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TTTCTTCTAACA

Flanking Amino Acid:

QNCMQSPVRPGQILPTNRNT

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

71.2

40.6

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

85.3

0.79

0.7

81.6

30.4

Minor 5ss

32.9

-1.9

40.4

45.7

Minor BPS

63.1

0.41

1.6

77.1

33.3

Associated Gene:

Gene:

HLF

Ensembl Gene ID:

ENSAPLG00000004386

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004494

7326365 - 7358541

32177