Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_7438522_7439393_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7438522 - 7439393

Intron Length:

872

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTTG

5'SS Class:

strong_major

3'SS Sequence:

CCCCTCCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TTTACTTTATTA

Flanking Amino Acid:

GENLIGVTNERAVDILRTAS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

Major BPS

84.7

0.86

74.3

40.7

Major PPT

73.4

0.53

0.7

64.9

30.7

Minor 5ss

49.9

-0

2.4

66.4

45.1

Minor BPS

64.9

0.46

1.6

75.73

Associated Gene:

Gene:

STXBP4

Ensembl Gene ID:

ENSAPLG00000004179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024023

7378793 - 7443644

64852

ENSAPLT00000004300

7378793 - 7447699

68907