Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_7439464_7439992_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7439464 - 7439992

Intron Length:

529

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

ATTTCATTACAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

ATTTCATTACAA

Flanking Amino Acid:

ILPGGVAAVDSRLLTGDLIL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

0.9

82.5

29.6

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

63.7

0.31

1.1

62.5

Minor 5ss

39.3

-1.2

2.9

Minor BPS

55.5

0.17

72.59

38.8

Associated Gene:

Gene:

STXBP4

Ensembl Gene ID:

ENSAPLG00000004179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024023

7378793 - 7443644

64852

ENSAPLT00000004300

7378793 - 7447699

68907