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Intron Name: Anas_platyrhynchos_platyrhynchos_19_7450454_7450901_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7450454 - 7450901

Intron Length:

448

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CTCCCTCCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TATTTTCTAATT

Flanking Amino Acid:

EAGQYFNKIQCFCFEEQRLN

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.81

0.9

75.5

40.6

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

78.8

0.65

0.7

72.8

25.4

Minor 5ss

39.5

-1.2

50.7

39.9

Minor BPS

64.2

0.52

1.6

81.19

34.4

Associated Gene:

Gene:

COX11

Ensembl Gene ID:

ENSAPLG00000019353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047488

7449178 - 7451084

1907

ENSAPLT00000034038

7449178 - 7451084

1907