Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_7586491_7649331_R

Intron Information:

Intron Rank:

147259

Intron Class:

major

Intron Phase:

Intron Coordinates:

7586491 - 7649331

Intron Length:

62841

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CATTTCTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CATTTCTCAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

33.4

Major BPS

87.6

0.93

0.9

89.3

Major PPT

74.9

0.56

0.9

70.2

34.8

Minor 5ss

-1.1

53.2

44.1

Minor BPS

66.1

0.5

1.5

72.46

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044614

7549397 - 7649441

100045