Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_79512_79930_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79512 - 79930

Intron Length:

419

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGTGTCCC

5'SS Class:

major

3'SS Sequence:

GTTTTCTCATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

GTTTTCTCATTA

Flanking Amino Acid:

TQKTCLQTKNDELTQQLQEK

Intron Amino Acid Position:

1289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

60.2

38.5

Major BPS

84.8

0.86

85.7

34.9

Major PPT

75.5

0.57

0.9

75.5

34.3

Minor 5ss

36.3

-1.6

2.8

38.9

Minor BPS

53.8

0.12

1.8

67.91

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013659

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014366

51075 - 87160

36086

ENSAPLT00000008942

50339 - 87160

36822