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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8108148_8108789_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

8108148 - 8108789

Intron Length:

642

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

GCTCGTTTTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

CGAGTATTAATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.9

77.9

38.6

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

74.7

0.56

0.9

68.8

37.1

Minor 5ss

34.6

-1.7

2.7

34.2

41.4

Minor BPS

47.7

-0.1

1.7

52.33

39.2

Associated Gene:

Gene:

CA10

Ensembl Gene ID:

ENSAPLG00000003762

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017211

8107861 - 8306530

198670

ENSAPLT00000003854

8107861 - 8307451

199591