Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_83755_85049_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83755 - 85049

Intron Length:

1295

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TCAACACTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

ATTGTTTCAACA

Flanking Amino Acid:

DIQAALEEAEGSLEHKEVKI

Intron Amino Acid Position:

1553

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.6

1.17

0.7

96.8

6.8

Major BPS

71.2

0.53

70.3

31.9

Major PPT

67.2

0.39

0.9

63.2

38.2

Minor 5ss

26.9

-2.6

4.1

42.9

44.7

Minor BPS

57.8

0.24

1.6

69.17

37.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013659

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014366

51075 - 87160

36086

ENSAPLT00000008942

50339 - 87160

36822