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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8387608_8388247_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
8387608 - 8388247

Intron Length:
640

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAAGGCA

5'SS Class:
major

3'SS Sequence:
ATCTGTTTTCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CATAAAT

U12 Branch Point Sequence:
TTTTCTCAGACT

Flanking Amino Acid:
SESLPRGILEMKSCLPANQE

Intron Amino Acid Position:
206

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.8
0.7
1
69.1
35.5

Major BPS
62.2
0.3
1.1
68.9
33

Major PPT
77.6
0.62
0.9
69.6
41

Minor 5ss
28.9
-2.4
3.5
38.8
46.5

Minor BPS
56.8
0.29
2
83.72
37.5

Associated Gene:

Gene:
UTP18

Ensembl Gene ID:

Chromosome:
19

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8380964 - 8389943
8980

8381533 - 8389943
8411