Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_8408491_8409757_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8408491 - 8409757

Intron Length:

1267

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

TTATTCCTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

CTCCAATTAACA

Flanking Amino Acid:

RSIGHRFKRSDITKKQDAHF

Intron Amino Acid Position:

355

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

74.5

41.9

Major BPS

0.52

1.1

77.7

35.3

Major PPT

82.6

0.73

0.8

78.2

30.3

Minor 5ss

43.9

-0.7

3.2

62.5

43.1

Minor BPS

50.8

0.02

1.8

63.12

42.6

Associated Gene:

Gene:

MBTD1

Ensembl Gene ID:

ENSAPLG00000002996

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021539

8390731 - 8421921

31191

ENSAPLT00000003098

8392133 - 8421921

29789