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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8465703_8470385_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8465703 - 8470385

Intron Length:

4683

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCTAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

CCTTTTTCAAAC

Flanking Amino Acid:

QLESTTHSRIRKERPISLGI

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

30.2

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

77.2

0.61

0.9

74.2

34.4

Minor 5ss

45.5

-0.5

2.9

64.1

47.4

Minor BPS

49.9

-0

1.6

58.73

40.7

Associated Gene:

Gene:

SPAG9

Ensembl Gene ID:

ENSAPLG00000015555

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025430

8438784 - 8498453

59670

ENSAPLT00000016312

8438784 - 8498453

59670

ENSAPLT00000040472

8438784 - 8498453

59670

ENSAPLT00000030775

8438784 - 8498453

59670