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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8466537_8470385_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8466537 - 8470385

Intron Length:

3849

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTCTGA

5'SS Class:

major

3'SS Sequence:

CTTTTTCAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

CCTTTTTCAAAC

Flanking Amino Acid:

ALTQNLPRILRKERPISLGI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.1

58.9

42.7

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

77.2

0.61

0.9

74.2

34.4

Minor 5ss

42.2

-0.9

3.1

56.9

47.2

Minor BPS

49.9

-0

1.6

58.73

40.7

Associated Gene:

Gene:

SPAG9

Ensembl Gene ID:

ENSAPLG00000015555

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027468

8466084 - 8498453

32370