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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8485722_8486080_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8485722 - 8486080

Intron Length:

359

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGACT

5'SS Class:

strong_major

3'SS Sequence:

TAATCTTGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

GCAAGTTTAATC

Flanking Amino Acid:

SHVLCIASVPGARETDYPAG

Intron Amino Acid Position:

790

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

78.5

35.4

Major BPS

81.8

0.79

1.1

34.5

Major PPT

75.4

0.57

73.5

41.3

Minor 5ss

34.3

-1.8

3.3

49.5

46.5

Minor BPS

47.9

-0.1

1.8

52.14

39.6

Associated Gene:

Gene:

SPAG9

Ensembl Gene ID:

ENSAPLG00000015555

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025430

8438784 - 8498453

59670

ENSAPLT00000016312

8438784 - 8498453

59670

ENSAPLT00000040472

8438784 - 8498453

59670

ENSAPLT00000027468

8466084 - 8498453

32370