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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8488014_8488548_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8488014 - 8488548

Intron Length:

535

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATGCTTTTAATC

Flanking Amino Acid:

PTMWLGTQNGCLYVHSSVAQ

Intron Amino Acid Position:

972

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

89.7

0.89

0.7

84.7

30.1

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

62.9

0.38

1.2

65.28

34.6

Associated Gene:

Gene:

SPAG9

Ensembl Gene ID:

ENSAPLG00000015555

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025430

8438784 - 8498453

59670

ENSAPLT00000016312

8438784 - 8498453

59670

ENSAPLT00000040472

8438784 - 8498453

59670

ENSAPLT00000030775

8438784 - 8498453

59670

ENSAPLT00000027468

8466084 - 8498453

32370