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Intron Name: Anas_platyrhynchos_platyrhynchos_19_8489183_8490127_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8489183 - 8490127

Intron Length:

945

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTTTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

GTLAIFHRGVDGQWDLTNYH

Intron Amino Acid Position:

1022

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

82.1

37.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.9

0.61

77.9

34.4

Minor 5ss

45.8

-0.4

2.9

67.6

43.1

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

SPAG9

Ensembl Gene ID:

ENSAPLG00000015555

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025430

8438784 - 8498453

59670

ENSAPLT00000016312

8438784 - 8498453

59670

ENSAPLT00000040472

8438784 - 8498453

59670

ENSAPLT00000030775

8438784 - 8498453

59670

ENSAPLT00000027468

8466084 - 8498453

32370